Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm23363-201ENSMUST00000175024 79 ntBASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Gm8885-201ENSMUST00000189382 598 ntBASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1fQ9JIS7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Gm12997-201ENSMUST00000120207 640 ntBASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Gm25732-201ENSMUST00000175168 60 ntBASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Cacna1fQ9JIS7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gm14109-201ENSMUST00000118814 309 ntBASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gm13492-201ENSMUST00000119772 665 ntBASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gm17208-201ENSMUST00000168388 535 ntBASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.15■□□□□ 0.02
Cacna1fQ9JIS7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms