Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smco4Q9JIS3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.83□□□□□ -0.67
Smco4Q9JIS3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smco4Q9JIS3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smco4Q9JIS3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smco4Q9JIS3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Olfr286-202ENSMUST00000205305 969 ntBASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco4Q9JIS3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Gm12497-201ENSMUST00000138778 237 ntBASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Gm8520-201ENSMUST00000186517 868 ntBASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Gm44454-201ENSMUST00000198541 138 ntBASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms