Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm27631-201ENSMUST00000184163 466 ntBASIC12.73□□□□□ -0.37
Trim39Q9ESN2 AA619741-201ENSMUST00000195095 646 ntBASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.73□□□□□ -0.37
Trim39Q9ESN2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Gm5566-201ENSMUST00000116118 459 ntBASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Mir125a-201ENSMUST00000083545 68 ntBASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim39Q9ESN2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Gm15957-201ENSMUST00000118893 974 ntBASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim39Q9ESN2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim39Q9ESN2 BC001981-202ENSMUST00000191393 1545 ntBASIC12.71□□□□□ -0.38
Trim39Q9ESN2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim39Q9ESN2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim39Q9ESN2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim39Q9ESN2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim39Q9ESN2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim39Q9ESN2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim39Q9ESN2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim39Q9ESN2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim39Q9ESN2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim39Q9ESN2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms