Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube4bQ9ES00 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube4bQ9ES00 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube4bQ9ES00 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube4bQ9ES00 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube4bQ9ES00 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Gm18733-201ENSMUST00000173950 856 ntBASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Mzt1-203ENSMUST00000227948 952 ntBASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube4bQ9ES00 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13□□□□□ -0.33
Ube4bQ9ES00 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13□□□□□ -0.33
Ube4bQ9ES00 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13□□□□□ -0.33
Ube4bQ9ES00 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13□□□□□ -0.33
Ube4bQ9ES00 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube4bQ9ES00 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ube4bQ9ES00 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms