Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm25144-201ENSMUST00000179561 110 ntBASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm25352-201ENSMUST00000179815 110 ntBASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lime1Q9EQR5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Lime1Q9EQR5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Mir449b-201ENSMUST00000104833 80 ntBASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lime1Q9EQR5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms