Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
U2af1Q9D883 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.8■□□□□ 0.44
U2af1Q9D883 Gm17794-201ENSMUST00000220252 955 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 Gm26315-201ENSMUST00000083890 321 ntBASIC17.8■□□□□ 0.44
U2af1Q9D883 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.8■□□□□ 0.44
U2af1Q9D883 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
U2af1Q9D883 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.8■□□□□ 0.44
U2af1Q9D883 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
U2af1Q9D883 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.8■□□□□ 0.44
U2af1Q9D883 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2af1Q9D883 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Acot6-202ENSMUST00000222921 3622 ntBASIC17.79■□□□□ 0.44
U2af1Q9D883 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Gm27839-201ENSMUST00000184242 106 ntBASIC17.79■□□□□ 0.44
U2af1Q9D883 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Gm38671-201ENSMUST00000200573 130 ntBASIC17.79■□□□□ 0.44
U2af1Q9D883 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.79■□□□□ 0.44
U2af1Q9D883 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2af1Q9D883 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
U2af1Q9D883 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.78■□□□□ 0.44
U2af1Q9D883 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.78■□□□□ 0.44
U2af1Q9D883 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.78■□□□□ 0.44
U2af1Q9D883 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
U2af1Q9D883 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2af1Q9D883 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms