Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.85□□□□□ -0.35
Upk1aQ9D132 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.84□□□□□ -0.35
Upk1aQ9D132 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Mir6990-201ENSMUST00000183724 91 ntBASIC12.84□□□□□ -0.35
Upk1aQ9D132 Gm29541-201ENSMUST00000191351 678 ntBASIC12.84□□□□□ -0.35
Upk1aQ9D132 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.84□□□□□ -0.35
Upk1aQ9D132 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.84□□□□□ -0.35
Upk1aQ9D132 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk1aQ9D132 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk1aQ9D132 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.83□□□□□ -0.36
Upk1aQ9D132 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm18766-201ENSMUST00000189811 808 ntBASIC12.83□□□□□ -0.36
Upk1aQ9D132 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm6916-202ENSMUST00000205523 195 ntBASIC12.83□□□□□ -0.36
Upk1aQ9D132 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.83□□□□□ -0.36
Upk1aQ9D132 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk1aQ9D132 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk1aQ9D132 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk1aQ9D132 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk1aQ9D132 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk1aQ9D132 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk1aQ9D132 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms