Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx56Q9D0R4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm16215-201ENSMUST00000161990 637 ntBASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm43094-201ENSMUST00000196549 921 ntBASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gm17330-201ENSMUST00000221047 165 ntBASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx56Q9D0R4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Gm12485-201ENSMUST00000119641 291 ntBASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx56Q9D0R4 Gm24447-201ENSMUST00000083977 338 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms