Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Gm25287-201ENSMUST00000103846 110 ntBASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Gm22918-201ENSMUST00000103855 110 ntBASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 AA543401-201ENSMUST00000164248 1269 ntBASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Gm25948-201ENSMUST00000175334 112 ntBASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Mrpl55Q9CZ83 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 AC166574.6-201ENSMUST00000227889 1806 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm22175-201ENSMUST00000175007 78 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm9824-201ENSMUST00000178707 561 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm43767-201ENSMUST00000198933 381 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms