Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Cldnd1Q9CQX5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm14726-201ENSMUST00000120623 896 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm24548-201ENSMUST00000158650 108 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm2260-201ENSMUST00000184965 657 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm45186-201ENSMUST00000206874 478 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm30285-201ENSMUST00000214614 422 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.8□□□□□ -0.2
Cldnd1Q9CQX5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm14263-201ENSMUST00000117955 746 ntBASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm6447-201ENSMUST00000118905 835 ntBASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm18212-201ENSMUST00000211678 889 ntBASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldnd1Q9CQX5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms