Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm43124-201ENSMUST00000201878 278 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Gm13059-201ENSMUST00000119881 398 ntBASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.8□□□□□ -0.2
Retreg3Q9CQV4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm14928-201ENSMUST00000120198 477 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm12001-201ENSMUST00000121727 913 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm37684-201ENSMUST00000192779 355 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm18018-201ENSMUST00000198273 408 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm18905-201ENSMUST00000205454 928 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gm5425-201ENSMUST00000214125 459 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms