Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.47■□□□□ 0.07
Trim11Q99PQ2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.47■□□□□ 0.07
Trim11Q99PQ2 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim11Q99PQ2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Gm27306-201ENSMUST00000183970 107 ntBASIC15.46■□□□□ 0.07
Trim11Q99PQ2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim11Q99PQ2 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.46■□□□□ 0.06
Trim11Q99PQ2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim11Q99PQ2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Mir6956-201ENSMUST00000183598 62 ntBASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trim11Q99PQ2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms