Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Gm44124-201ENSMUST00000204159 472 ntBASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2a1Q99PM3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Gm13464-201ENSMUST00000119418 935 ntBASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gtf2a1Q99PM3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Gm43522-201ENSMUST00000196697 1922 ntBASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Olfr286-202ENSMUST00000205305 969 ntBASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Gm18101-201ENSMUST00000215769 548 ntBASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms