Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Gm18766-201ENSMUST00000189811 808 ntBASIC13.31□□□□□ -0.28
Trim8Q99PJ2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Gm18049-201ENSMUST00000208909 581 ntBASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim8Q99PJ2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Gm27494-201ENSMUST00000184735 189 ntBASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms