Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Gm8018-201ENSMUST00000173536 789 ntBASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Gm43058-201ENSMUST00000197645 625 ntBASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Gm17812-201ENSMUST00000204935 318 ntBASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh15Q99PJ1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Gm14832-201ENSMUST00000121289 322 ntBASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Mir6546-201ENSMUST00000184460 62 ntBASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh15Q99PJ1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm12134-201ENSMUST00000122109 520 ntBASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm14665-201ENSMUST00000122294 557 ntBASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh15Q99PJ1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Gm5070-201ENSMUST00000177599 862 ntBASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh15Q99PJ1 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.92□□□□□ -0.02
Pcdh15Q99PJ1 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdh15Q99PJ1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh15Q99PJ1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdh15Q99PJ1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh15Q99PJ1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh15Q99PJ1 Gm12015-201ENSMUST00000117065 843 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms