Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Syt7-204ENSMUST00000223586 1344 ntBASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubqln4Q99NB8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ubqln4Q99NB8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ubqln4Q99NB8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ubqln4Q99NB8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ubqln4Q99NB8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubqln4Q99NB8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gm15321-201ENSMUST00000121290 288 ntBASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubqln4Q99NB8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms