Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scrt1Q99M85 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scrt1Q99M85 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scrt1Q99M85 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scrt1Q99M85 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm11524-201ENSMUST00000119349 807 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm12882-201ENSMUST00000121696 517 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm27516-201ENSMUST00000184237 98 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Mir8109-201ENSMUST00000184375 117 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm18056-201ENSMUST00000207670 568 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm18061-201ENSMUST00000208350 562 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm18063-201ENSMUST00000208529 568 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm18052-201ENSMUST00000208750 559 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.89□□□□□ -0.51
Scrt1Q99M85 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scrt1Q99M85 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Gm12384-201ENSMUST00000119228 919 ntBASIC11.88□□□□□ -0.51
Scrt1Q99M85 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Gm6013-201ENSMUST00000212264 699 ntBASIC11.88□□□□□ -0.51
Scrt1Q99M85 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.88□□□□□ -0.51
Scrt1Q99M85 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms