Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Gm4804-201ENSMUST00000182234 999 ntBASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap3Q99LM2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Gm15393-201ENSMUST00000120499 219 ntBASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap3Q99LM2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm25144-201ENSMUST00000179561 110 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm25352-201ENSMUST00000179815 110 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm2756-201ENSMUST00000195851 400 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms