Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp11Q99K46 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp11Q99K46 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp11Q99K46 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp11Q99K46 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp11Q99K46 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp11Q99K46 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Usp11Q99K46 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp11Q99K46 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp11Q99K46 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Mir7684-201ENSMUST00000183858 60 ntBASIC14.32□□□□□ -0.12
Usp11Q99K46 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp11Q99K46 Gm33320-201ENSMUST00000192232 530 ntBASIC14.32□□□□□ -0.12
Usp11Q99K46 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Usp11Q99K46 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp11Q99K46 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp11Q99K46 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp11Q99K46 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.31□□□□□ -0.12
Usp11Q99K46 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp11Q99K46 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp11Q99K46 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp11Q99K46 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp11Q99K46 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Usp11Q99K46 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.3□□□□□ -0.12
Usp11Q99K46 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp11Q99K46 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp11Q99K46 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.3□□□□□ -0.12
Usp11Q99K46 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp11Q99K46 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Usp11Q99K46 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp11Q99K46 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp11Q99K46 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp11Q99K46 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp11Q99K46 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp11Q99K46 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp11Q99K46 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp11Q99K46 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp11Q99K46 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp11Q99K46 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp11Q99K46 Gm15460-201ENSMUST00000118147 391 ntBASIC14.29□□□□□ -0.12
Usp11Q99K46 Gm14057-201ENSMUST00000120631 482 ntBASIC14.29□□□□□ -0.12
Usp11Q99K46 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.29□□□□□ -0.12
Usp11Q99K46 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.29□□□□□ -0.12
Usp11Q99K46 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp11Q99K46 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms