Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Gm27622-201ENSMUST00000183779 60 ntBASIC12.38□□□□□ -0.43
Lims1Q99JW4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lims1Q99JW4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm5312-201ENSMUST00000203728 547 ntBASIC12.37□□□□□ -0.43
Lims1Q99JW4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.37□□□□□ -0.43
Lims1Q99JW4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lims1Q99JW4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Gm25144-201ENSMUST00000179561 110 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Gm25352-201ENSMUST00000179815 110 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Mir6956-201ENSMUST00000183598 62 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Gm46209-201ENSMUST00000217912 553 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms