Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdk9Q99J95 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.65□□□□□ -0.22
Cdk9Q99J95 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.65□□□□□ -0.22
Cdk9Q99J95 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Syt7-205ENSMUST00000224135 1557 ntBASIC13.65□□□□□ -0.22
Cdk9Q99J95 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk9Q99J95 Paupar-201ENSMUST00000194826 3482 ntBASIC13.65□□□□□ -0.23
Cdk9Q99J95 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdk9Q99J95 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
Cdk9Q99J95 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.64□□□□□ -0.23
Cdk9Q99J95 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.64□□□□□ -0.23
Cdk9Q99J95 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms