Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gm7399-201ENSMUST00000032395 858 ntBASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc1bQ920F6 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.66■□□□□ 0.1
Smc1bQ920F6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.65■□□□□ 0.1
Smc1bQ920F6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.65■□□□□ 0.1
Smc1bQ920F6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1bQ920F6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.64■□□□□ 0.09
Smc1bQ920F6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smc1bQ920F6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Gm5370-201ENSMUST00000187187 574 ntBASIC15.63■□□□□ 0.09
Smc1bQ920F6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1bQ920F6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms