Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha9Q91Y11 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Gm13689-201ENSMUST00000119360 685 ntBASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha9Q91Y11 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gm8515-201ENSMUST00000194852 576 ntBASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha9Q91Y11 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms