Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb1Q91Y08 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm28760-201ENSMUST00000185995 736 ntBASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb1Q91Y08 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Gm43094-201ENSMUST00000196549 921 ntBASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Gm5186-201ENSMUST00000218781 920 ntBASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Gm5161-201ENSMUST00000075243 853 ntBASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb1Q91Y08 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb1Q91Y08 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm12485-201ENSMUST00000119641 291 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms