Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Gm25261-201ENSMUST00000157416 134 ntBASIC15.47■□□□□ 0.07
Trex1Q91XB0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Gm25927-201ENSMUST00000175058 117 ntBASIC15.47■□□□□ 0.07
Trex1Q91XB0 Gm27501-201ENSMUST00000183599 107 ntBASIC15.47■□□□□ 0.07
Trex1Q91XB0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.47■□□□□ 0.07
Trex1Q91XB0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trex1Q91XB0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Gm16202-201ENSMUST00000117532 544 ntBASIC15.46■□□□□ 0.07
Trex1Q91XB0 Gm8805-201ENSMUST00000117848 313 ntBASIC15.46■□□□□ 0.07
Trex1Q91XB0 Gm14723-201ENSMUST00000118686 215 ntBASIC15.46■□□□□ 0.07
Trex1Q91XB0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Gm27516-201ENSMUST00000184237 98 ntBASIC15.46■□□□□ 0.07
Trex1Q91XB0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.46■□□□□ 0.07
Trex1Q91XB0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.46■□□□□ 0.07
Trex1Q91XB0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.46■□□□□ 0.07
Trex1Q91XB0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trex1Q91XB0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
Trex1Q91XB0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trex1Q91XB0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.46■□□□□ 0.06
Trex1Q91XB0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trex1Q91XB0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.45■□□□□ 0.06
Trex1Q91XB0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.45■□□□□ 0.06
Trex1Q91XB0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms