Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Vsx1Q91V10 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Gm12241-201ENSMUST00000118330 726 ntBASIC13.38□□□□□ -0.27
Vsx1Q91V10 Gm12997-201ENSMUST00000120207 640 ntBASIC13.38□□□□□ -0.27
Vsx1Q91V10 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx1Q91V10 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Mir686-201ENSMUST00000102174 109 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gm17376-201ENSMUST00000166016 84 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gm10268-201ENSMUST00000085340 555 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx1Q91V10 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 237.2 ms