Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.04□□□□□ -0.16
Trim60Q8VI40 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim60Q8VI40 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Mir449b-201ENSMUST00000104833 80 ntBASIC14.03□□□□□ -0.16
Trim60Q8VI40 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.03□□□□□ -0.16
Trim60Q8VI40 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.03□□□□□ -0.16
Trim60Q8VI40 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.03□□□□□ -0.16
Trim60Q8VI40 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Gm27533-201ENSMUST00000183800 152 ntBASIC14.03□□□□□ -0.16
Trim60Q8VI40 Gm46209-201ENSMUST00000217912 553 ntBASIC14.03□□□□□ -0.16
Trim60Q8VI40 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim60Q8VI40 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.02□□□□□ -0.16
Trim60Q8VI40 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim60Q8VI40 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.02□□□□□ -0.16
Trim60Q8VI40 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Gm6912-201ENSMUST00000117218 544 ntBASIC14.02□□□□□ -0.17
Trim60Q8VI40 Gm15770-201ENSMUST00000117498 584 ntBASIC14.02□□□□□ -0.17
Trim60Q8VI40 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Gm43575-201ENSMUST00000196420 516 ntBASIC14.02□□□□□ -0.17
Trim60Q8VI40 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim60Q8VI40 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms