Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx39aQ8VDW0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx39aQ8VDW0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx39aQ8VDW0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx39aQ8VDW0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx39aQ8VDW0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx39aQ8VDW0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.03■□□□□ -0
Ddx39aQ8VDW0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx39aQ8VDW0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Gm6007-201ENSMUST00000208170 823 ntBASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx39aQ8VDW0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx39aQ8VDW0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Gm5687-201ENSMUST00000118252 640 ntBASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Snora78-201ENSMUST00000158630 128 ntBASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx39aQ8VDW0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms