Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rprd1aQ8VDS4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Gm7653-201ENSMUST00000214567 508 ntBASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rprd1aQ8VDS4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gm11918-201ENSMUST00000121660 179 ntBASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rprd1aQ8VDS4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rprd1aQ8VDS4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rprd1aQ8VDS4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rprd1aQ8VDS4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rprd1aQ8VDS4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rprd1aQ8VDS4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rprd1aQ8VDS4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rprd1aQ8VDS4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Gm15678-201ENSMUST00000117573 960 ntBASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Gm12138-201ENSMUST00000122180 951 ntBASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms