Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm13829-201ENSMUST00000119600 138 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm12485-201ENSMUST00000119641 291 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm26464-201ENSMUST00000157094 305 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm17150-201ENSMUST00000165577 381 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm27892-201ENSMUST00000185017 106 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Mir698-201ENSMUST00000102164 109 ntBASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Gm15429-201ENSMUST00000151268 798 ntBASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Gm6266-201ENSMUST00000203844 806 ntBASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.8□□□□□ -0.36
Ndc1Q8VCB1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Gm6244-201ENSMUST00000178732 841 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms