Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gm13453-201ENSMUST00000118708 357 ntBASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gm27321-201ENSMUST00000185021 205 ntBASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gm17837-201ENSMUST00000186435 985 ntBASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.59□□□□□ -0.23
Vps39Q8R5L3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps39Q8R5L3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.59□□□□□ -0.23
Vps39Q8R5L3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps39Q8R5L3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
Vps39Q8R5L3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.58□□□□□ -0.23
Vps39Q8R5L3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.58□□□□□ -0.23
Vps39Q8R5L3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Gm43703-201ENSMUST00000200523 763 ntBASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms