Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Top1mtQ8R4U6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Gm12485-201ENSMUST00000119641 291 ntBASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Gm6218-201ENSMUST00000219812 628 ntBASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Gm17330-201ENSMUST00000221047 165 ntBASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Top1mtQ8R4U6 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.21■□□□□ 0.18
Top1mtQ8R4U6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Top1mtQ8R4U6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm15376-201ENSMUST00000122258 783 ntBASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm19078-201ENSMUST00000206311 727 ntBASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm7730-201ENSMUST00000212486 454 ntBASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm5161-201ENSMUST00000075243 853 ntBASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm24447-201ENSMUST00000083977 338 ntBASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Top1mtQ8R4U6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Top1mtQ8R4U6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms