Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gm15427-201ENSMUST00000117288 531 ntBASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 AA619741-201ENSMUST00000195095 646 ntBASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm2651-201ENSMUST00000203560 838 ntBASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc58Q8R3Q6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc58Q8R3Q6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc58Q8R3Q6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 AA543401-201ENSMUST00000164248 1269 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm29310-201ENSMUST00000185468 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21825-201ENSMUST00000185728 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm29109-201ENSMUST00000185895 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21896-201ENSMUST00000186520 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21873-201ENSMUST00000186728 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21794-201ENSMUST00000187056 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21880-201ENSMUST00000187275 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21826-201ENSMUST00000187451 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21198-201ENSMUST00000188393 696 ntBASIC12.14□□□□□ -0.47
Ccdc58Q8R3Q6 Gm21749-201ENSMUST00000189343 696 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms