Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sf3a1Q8K4Z5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Gm14928-201ENSMUST00000120198 477 ntBASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Gm18018-201ENSMUST00000198273 408 ntBASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sf3a1Q8K4Z5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sf3a1Q8K4Z5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Gm18307-201ENSMUST00000206864 949 ntBASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Gm17330-201ENSMUST00000221047 165 ntBASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sf3a1Q8K4Z5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms