Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtn1Q8K0T0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm12403-201ENSMUST00000121384 959 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rtn1Q8K0T0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Gm38116-201ENSMUST00000193873 1533 ntBASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rtn1Q8K0T0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtn1Q8K0T0 Mir6392-201ENSMUST00000184924 108 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms