Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfwd3Q8CIK8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.77□□□□□ -0.36
Rfwd3Q8CIK8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfwd3Q8CIK8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfwd3Q8CIK8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.77□□□□□ -0.36
Rfwd3Q8CIK8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfwd3Q8CIK8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfwd3Q8CIK8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfwd3Q8CIK8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfwd3Q8CIK8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Gm27772-201ENSMUST00000184900 187 ntBASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Gm5279-201ENSMUST00000199575 745 ntBASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfwd3Q8CIK8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms