Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Gm11618-201ENSMUST00000117946 267 ntBASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Rab11fip3Q8CHD8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip3Q8CHD8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.47■□□□□ 0.39
Rab11fip3Q8CHD8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Gm14350-201ENSMUST00000116642 640 ntBASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Gm17420-201ENSMUST00000164753 153 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms