Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc5Q8CG46 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Smc5Q8CG46 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc5Q8CG46 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.77■□□□□ 0.28
Smc5Q8CG46 Gm45841-201ENSMUST00000207700 164 ntBASIC16.77■□□□□ 0.28
Smc5Q8CG46 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc5Q8CG46 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc5Q8CG46 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Smc5Q8CG46 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.76■□□□□ 0.27
Smc5Q8CG46 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.76■□□□□ 0.27
Smc5Q8CG46 Gm14822-201ENSMUST00000122247 291 ntBASIC16.76■□□□□ 0.27
Smc5Q8CG46 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Mir7221-201ENSMUST00000184009 72 ntBASIC16.76■□□□□ 0.27
Smc5Q8CG46 Gm38294-201ENSMUST00000192831 381 ntBASIC16.76■□□□□ 0.27
Smc5Q8CG46 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc5Q8CG46 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc5Q8CG46 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm11594-201ENSMUST00000122313 162 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm24513-201ENSMUST00000174964 138 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm27618-201ENSMUST00000183671 60 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm27680-201ENSMUST00000184192 160 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Gm5425-201ENSMUST00000214125 459 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms