Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc87Q8CDL9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc87Q8CDL9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm9719-201ENSMUST00000162765 543 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm25144-201ENSMUST00000179561 110 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm25352-201ENSMUST00000179815 110 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Mir7023-201ENSMUST00000185093 64 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm28630-201ENSMUST00000187806 498 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm38294-201ENSMUST00000192831 381 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm37714-201ENSMUST00000194742 342 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc87Q8CDL9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms