Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Gm12091-201ENSMUST00000146791 830 ntBASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc60Q8C4J0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc60Q8C4J0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc60Q8C4J0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Ccdc60Q8C4J0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms