Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ptcd1Q8C2E4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Gm24447-201ENSMUST00000083977 338 ntBASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ptcd1Q8C2E4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Gm5687-201ENSMUST00000118252 640 ntBASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ptcd1Q8C2E4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ptcd1Q8C2E4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm13369-201ENSMUST00000119442 987 ntBASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm27320-201ENSMUST00000184892 109 ntBASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ptcd1Q8C2E4 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms