Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm45612-201ENSMUST00000211320 160 ntBASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tsen54Q8C2A2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Mir1895-201ENSMUST00000122615 79 ntBASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Rpph1-201ENSMUST00000175096 319 ntBASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Gm27494-201ENSMUST00000184735 189 ntBASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tsen54Q8C2A2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.34□□□□□ -0.59
Tsen54Q8C2A2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tsen54Q8C2A2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tsen54Q8C2A2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tsen54Q8C2A2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tsen54Q8C2A2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.34□□□□□ -0.59
Tsen54Q8C2A2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms