Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gm26315-201ENSMUST00000083890 321 ntBASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nup54Q8BTS4 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gm6244-201ENSMUST00000178732 841 ntBASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gm27892-201ENSMUST00000185017 106 ntBASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Gm7287-201ENSMUST00000205267 602 ntBASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup54Q8BTS4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms