Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Syt7-205ENSMUST00000224135 1557 ntBASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gm18027-201ENSMUST00000218947 619 ntBASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gm6218-201ENSMUST00000219812 628 ntBASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4Q8BQZ5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Gm2445-201ENSMUST00000182798 989 ntBASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4Q8BQZ5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Gm20445-201ENSMUST00000061905 565 ntBASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4Q8BQZ5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms