Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp2bQ8BJF9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm11594-201ENSMUST00000122313 162 ntBASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp2bQ8BJF9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Mir698-201ENSMUST00000102164 109 ntBASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Gm14822-201ENSMUST00000122247 291 ntBASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Mir1897-201ENSMUST00000122581 272 ntBASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Gm5779-201ENSMUST00000218467 910 ntBASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp2bQ8BJF9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chmp2bQ8BJF9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chmp2bQ8BJF9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Chmp2bQ8BJF9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chmp2bQ8BJF9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms