Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynbQ8BI41 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynbQ8BI41 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynbQ8BI41 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynbQ8BI41 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynbQ8BI41 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynbQ8BI41 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynbQ8BI41 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.99□□□□□ -0.33
SynbQ8BI41 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SynbQ8BI41 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SynbQ8BI41 Gm6244-201ENSMUST00000178732 841 ntBASIC12.99□□□□□ -0.33
SynbQ8BI41 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.99□□□□□ -0.33
SynbQ8BI41 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.99□□□□□ -0.33
SynbQ8BI41 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.99□□□□□ -0.33
SynbQ8BI41 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SynbQ8BI41 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.99□□□□□ -0.33
SynbQ8BI41 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.99□□□□□ -0.33
SynbQ8BI41 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynbQ8BI41 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SynbQ8BI41 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.98□□□□□ -0.33
SynbQ8BI41 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Gm12742-201ENSMUST00000117326 410 ntBASIC12.98□□□□□ -0.33
SynbQ8BI41 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.98□□□□□ -0.33
SynbQ8BI41 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.98□□□□□ -0.33
SynbQ8BI41 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.98□□□□□ -0.33
SynbQ8BI41 Gm45841-201ENSMUST00000207700 164 ntBASIC12.98□□□□□ -0.33
SynbQ8BI41 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SynbQ8BI41 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Grk6-205ENSMUST00000224653 2976 ntBASIC12.98□□□□□ -0.33
SynbQ8BI41 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.98□□□□□ -0.33
SynbQ8BI41 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynbQ8BI41 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.97□□□□□ -0.33
SynbQ8BI41 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.97□□□□□ -0.33
SynbQ8BI41 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.97□□□□□ -0.33
SynbQ8BI41 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.97□□□□□ -0.33
SynbQ8BI41 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SynbQ8BI41 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SynbQ8BI41 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.97□□□□□ -0.33
SynbQ8BI41 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SynbQ8BI41 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SynbQ8BI41 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.97□□□□□ -0.33
SynbQ8BI41 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynbQ8BI41 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SynbQ8BI41 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms