Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 BC001981-202ENSMUST00000191393 1545 ntBASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm15590-201ENSMUST00000078419 552 ntBASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc5a7Q8BGY9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc5a7Q8BGY9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms