Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4dQ8BGV9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Gm5687-201ENSMUST00000118252 640 ntBASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms