Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Gm18206-201ENSMUST00000207027 926 ntBASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim6Q8BGE7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm14494-201ENSMUST00000118786 435 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm27631-201ENSMUST00000184163 466 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm27741-201ENSMUST00000185060 237 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.4□□□□□ -0.1
Trim6Q8BGE7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Pck2-205ENSMUST00000226352 2784 ntBASIC14.39□□□□□ -0.11
Trim6Q8BGE7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gm37714-201ENSMUST00000194742 342 ntBASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms