Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm14277-201ENSMUST00000121195 360 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm24514-201ENSMUST00000174961 285 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm32025-201ENSMUST00000217960 307 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm23270-201ENSMUST00000104055 131 ntBASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm13570-201ENSMUST00000140763 309 ntBASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm17208-201ENSMUST00000168388 535 ntBASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.15■□□□□ 0.02
Trnp1Q80ZI1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Gm12217-201ENSMUST00000118858 696 ntBASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Gm12502-201ENSMUST00000120197 444 ntBASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Gm43947-201ENSMUST00000203019 959 ntBASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms